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Natural Prodcast Episode 23: Aaron Puri
… of their synthases so that we can start to use the DNA sequence to predict or just understand better the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… wise maybe, what genome mining is, then, is looking at DNA sequence and trying to find the things that you want to … understanding those broader environmental and ecological roles for secondary metabolites is what our mission is. … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they … biological and environmental samples — including microbes, fungi, plants and soils. Through a combination of …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers … tools for workflow management and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate hypotheses …
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Special Initiatives & Programs
… 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the minimum is 100 kb, and for … and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted …
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Scientific Advisory Committee
… at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …
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Frequently Asked Questions: Project Management
Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … manager may then schedule and allocate resources for DNA sequencing. … No. However, the JGI does maintain a list … IMG/M   (citation: https://doi.org/10.1093/nar/gkaa939 Fungi: Mycocosm (citation: …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA synthesis and assembly group: Our production group … facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader …
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Workforce Development & Education Outreach
… the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics …
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Exploring the Roles of DNA Methylation in the Metal-Reducing Bacterium Shewanella oneidensis MR-1
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Natural Prodcast Episode 6: Marc Chevrette
… [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s presentation … at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Natural Prodcast Episode 2: The Primer, Part 2
… bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … of primary metabolism. So a lot of the genes and the DNA that’s used for secondary metabolism, they are copies … a brief history of drug discovery and natural products’ role in it. All right, this is probably one of the most …
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