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Natural Prodcast Episode 5: Brad Moore
… chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … four double bonds in this one region of the molecule.  Dan: Big, complex molecule.  Brad: It was a complex chemical. …
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Natural Prodcast Episode 2: The Primer, Part 2
… and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … top of this photograph, or one corner of it, you see this big white blob – sort of overexposed – but this this white …
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Single Cell Research Group
… focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …
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Microbial Program
… datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, … and fragments. … GOLD is a web resource for comprehensive access to information regarding genome and metagenome …
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Genome Insider
… understand — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute … of this policy) produced through all user projects accepted FY22 and later through the Community Science Program … two years after release to JGI portals). JGI will no longer produce use-restricted data except in already active …
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Natural Prodcast Episode 9: Roger Linington
… to build The Natural Product Atlas , or NPAtlas, a freely accessible natural products structure database, which is … just invaluable to the natural products community. It’s a big international community effort, and I want to say thank … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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User Advisory Committees
… science including technical capabilities offered, proposal review procedures and the annual user meeting. The UEC … within the user community. … The SAC is a board convened by the JGI Director to provide a scientific and technical … technology (IT) activities and strategic plan. … The Plant Program Advisory Committee is chartered to offer …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is to generate … DOE crop plants, so we can learn from evolution that has occurred throughout plant history.”   … 1KFG project on …
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Natural Prodcast Episode 23: Aaron Puri
And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … something like E. coli , but it’s doable. And that was a big part of my postdoc was trying to make that a little bit … DAN: Almost like you know that there is. AARON PURI: It’s a planted question Dan. Yeah. So overall I think what we’re …
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Small cells with big secrets
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Small partners, big impacts
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