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The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … and cloned into a vector of choice; up to 210,000 variants can be made Pool of variant libraries; sample sequencing to … reference transcriptome), DGE, alignment files 134/134 Viral Minimal Draft Draft quality viral assembly, many …

Researchers at the JGI develop a tool to quickly and accurately … most common forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A … IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … large populations of bacteria and archaea in their natural environments using single cell approaches. This … the largest publicly available collection of Uncultivated Viral Genomes, derived from genomes, metagenomes, and …

JGI Mission As a U.S. Department of Energy Office of Science user … Creek, California, to consolidate activities. The significant economies of scale achieved in doing so enabled the JGI … for bioenergy and bioproduction, enhance understanding of natural environmental processes relevant to DOE, and advance …

… “Adopt a Genome” is an informal program for faculty to … Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven … of the denitrifying thermophile Geobacillus thermodenitrificans subsp. calidus DSM 22629T. M Snook, et. al.  2024 . …

Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del … Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website … and additional required documentation here .  … You can request a JGI Single Sign On account at …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To … before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to …

Developed in 2017, the PDT was established in part to help better-connect industry to … one or more partners for shared benefit. Industry partners can retain rights to their own inventions and have the first … … For additional information about SSP or CRADA partnering mechanisms, visit Berkeley Lab’s  Innovation and Partnership …

The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, … user-accessible project types, in which DNA-based molecules can be chromosomally integrated into a taxonomically diverse …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … teams at the JGI are focused on what those viruses can do. For example, understanding virus-host dynamics in … vein, characterizing CRISPR defense and anti-CRISPR mechanisms in a broader range of viral genomes would give …