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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint … Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the … bioinformatic methods to bridge the gap from sequence to biology. …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … of algae? You now have one place where you can browse the genetic blueprints of these photosynthetic organisms. … reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … of algae? You now have one place where you can browse the genetic blueprints of these photosynthetic organisms. … reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many …
Learn more
A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial populations in oxygen …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny … Program, which explores genomics of algal diversity and biology to support basic science as well as bioenergy and … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in … analyses and software to enable “grand-scale” scientific projects. These solutions include large-scale genome … in solving DOE’s most challenging problems. … PhD Cell Biology. Duke University MS Developmental Biology, Chinese …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  … to Filter Sequences There are more microbes on the planet than particles in a handful of dirt, and viruses vastly … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Program was brimming with excitement and determination as they came onsite. From data carpentry to science … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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