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High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … playing key roles in regulating global nutrient cycles. The information gained from understanding the interactions …
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How Microbes Can Protect Plants in Drier Straits
New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab. In addition to … Yasuo Yoshikuni, head of the JGI’s DNA Synthesis Science program, underscored the value of taking a look at the AT … metabolism, this team built a phylogenetic tree using bioinformatic software called FastTree and identified 62 …
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Alabama A&M Interns Access An Abundance of Knowledge
Institute and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the DOE … in hopes of transferring these skills to a DMD to a PhD program. LaMonika Dent : I hope to gain hands-on experience …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of interest.” The combination of field data and genetic information has allowed the research team to associate … he added. Jeremy Schmutz , head of the  JGI Plant Program , drew parallels between these  common gardens and …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group performs custom …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and … DOE Office of Science as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, reached this milestone with … Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of the fittest” theory — …
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SPRUCE-ing Up Science
… the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the … despite global warming.  At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and computer … to develop a tool that leveraged machine learning to help users determine which computer program would best serve …
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