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… CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic … (“contigs”) from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common …

… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and … (SIMB) Natural Products meeting in San Diego in January 2020. You can find the podcast on Apple , Google , Spotify , …

… these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …

… National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols … Biological and Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support … were also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at …

… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close …

… leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the …

… the genome as if it were a language, then we can take advantage of existing methodologies developed for natural … conducted by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater … its demand for substantial operational resources.  ”The metagenomics data generated by the JGI are very …