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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… and recaps of all three keynote talks follow, starting with Bruce Hungate. Other videos of talks from the JGI … like poetry.” True to the introduction, Hungate spoke with real enthusiasm, even delight. He qualified his talk … here . Edward Holmes, University of Sydney Using protein structures to assess scope of the virosphere Keynote Talk …
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Game On: High School Students Drive Everglades Metagenomics Study
… The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do you want to find out what is in this … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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The crystal structure of Grindelia robusta 7,13-copalyl diphosphate synthase reveals active site features controlling catalytic specificity
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the … at once — rather than cultivating a single microorganism within a lab setting.  Roland Hatzenpichler is an associate …
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Simon Roux
… Program. His responsibilities include the development of novel computational tools to identify virus sequences, the … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. The ISME Journal …
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Special Initiatives & Programs
… are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and DE-FOA-0003615 , … Proposals whose scope was not previously negotiated with the JGI will only be accepted pending available capacity, technical review and scope negotiation with the JGI.  Investigators with grants funded by DOE-BER …
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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JGI Portals
… a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and … relationships as well as insights into clade-specific novelties and expansions.  …
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Soil virus offers insight into maintaining microorganisms
… viruses are a reservoir of genetic diversity and capable of transferring genes from one host microbe to another, which … can have a significant impact on the microbial communities within soil. Using metagenomics, scientists can shed light … auxiliary metabolic genes (AMGs) that have nothing to do with a virus’ primary focus — replicating itself.  Chitin is …
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