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Selection to sequence: opportunities in fungal genomics
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Frameshift detection in prokaryotic genomic sequences.
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Draft Genome Sequences of Switchgrass Diazotrophs
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Annotation of metagenome short reads using proxygenes
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Transcriptional control of Clostridium autoethanogenum using CRISPRi
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An Integrated Dataset to Understand Ecosystem Interaction
… wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Tracking the Origins of Methane-Producing Microbes
… Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … lab had previously collaborated with the JGI on a proposal using this approach through the Emerging Technologies Opportunity Program (ETOP). Following that …
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Identification of candidate genes in Arabidopsis and Populus cell wall biosynthesis using text-mining, co-expression network analysis and comparative genomics
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Boosting Small Molecule Production in Super “Soup”
… Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … but, that was not a known fact in the field whatsoever.” Focusing on Carbon Flux and Future Directions The team reported … through this technology.” “This is a fantastic example of rapid-prototyping systems for metabolic pathways that we …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, metabolomics and data analyses … 4. Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… of Energy national user facilities – the DOE Joint Genome Institute and the Molecular Foundry – both located at … Foundry researchers then performed imaging analyses, using several microscopy techniques to confirm that the … to make, and it could be sold in the United States for $50-200, generating a potential profit of $1.4 million …
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …
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