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Sequencing of Genomes from Environmental Single Cells
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Genome sequence of the model mushroom Schizophyllum commune
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Complete genome sequence of “Thioalkalivibrio sulfidophilus” HL-EbGr7
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Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria
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Identification of ancient remains through genomic sequencing
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Metagenomic Sequencing of Two Salton Sea Microbiomes
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the … Walnut Creek and deciding on what was essential. There were multiple waste streams to consider, including unneeded …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published …
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iPHoP: A Matchmaker for Phages and their Hosts
With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … freely available online ). It combines and evaluates multiple predictions to reliably match viruses with their …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. That …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … regulated by viruses in their environments. Environmental DNA sequencing can help scientist to recover the genomes of … perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps …
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first students to participate in the DOE Joint Genome … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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