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Translating macroecological models to predict microbial establishment probability in an agricultural inoculant introduction
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Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional …
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … in areas such as developing pathogen-agnostic detection and prediction strategies for types of as-yet unknown pathogens. …
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Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample
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EnZymClass: Substrate specificity prediction tool of plant acyl-ACP thioesterases based on ensemble learning
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Tanja Woyke Elected to American Academy of Microbiology
Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … of 2020, selected from 118 nominees. The selection process for AAM Fellows is based on their records of scientific … research focuses on developing and harnessing single-cell methods to access the genetic material of uncultivated …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … great science that will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow … than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane production. They are thought to use billions … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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