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… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic … the virus-host boundary clearly defined using functional annotation methods, it was possible to distinguish between …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … For example, the number of plant cell wall-degrading enzymes such as ligninases and cellulases were much lower in … these datasets will assist researchers in moving toward functional genomics studies to learn more about the inner …

… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … community and consider new initiatives in areas such as functional studies (e.g., a functional encyclopedia building … of the JGI Annual Meeting. Any investigator who has been an active user of the JGI at any time in the past two fiscal …

… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … suite is a community resource for comparative analysis and annotation of all publicly available genomes in three … IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down chitin. A protein tree was then …

… sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … green algal genomes using Chlamy as a reference for functional annotation, including Chromochloris zofingiensis , which has … C. zofingiensis on Phytozome …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … Dr. Vogel’s current research is focused on developing plant functional genomic resources (e.g. sequenced mutant …