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… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … isotopically-labeled compounds to link active microbes with specific metabolic processes. A third approach steps away …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What … to those in typical bacterial or archaeal genomes, the sequence is most likely not an inovirus. But if these nearby …

… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … of Sciences bridges this gap, by tracing the evolution of a specific enzyme family called aminotransferases (ATs). These … as well as recycling nitrogen. Now, with insight into a specific enzyme class that’s important to the way many …

… Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger … In Vivo Enhancers. Science 3426157. Blow et al 2010. ChIP-Seq identification of weakly conserved heart enhancers. Nat … Selected Publications …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … to a lab, because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps …

… These experiments can show which microbes are handling specific nutrients, or what they're doing with those … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … more reusable, and more insightful, for the future of studying microbial communities.   …

… UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with … The microbes in cone snails may be involved in venom activity, which is part of a larger consortium Ul-Hasan has …

… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected … analyses, transcriptomics for microbial genomic activity (gene expression), and direct microscopy. Through … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …

… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is … over the decade that I worked with Dan to develop this specific procedure.” The rapport they built during this …

… UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … JGI staff. According to Axel Visel and Zhong Wang, founders of this internship program, this was the largest turnout for … with at least one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or …