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Kaushal Sharma, one of five Antioch High School rising juniors who participated in … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, …

Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these … Matt also supports various CSP and FICUS user projects for the Metagenome Program. …

Our data platforms are a key resource for the broader scientific community and require constant developments to meet the ever-changing … Portal provides unified access to all JGI genomic databases and analytical tools for all JGI sequencing projects. …

Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

Analysis reveals cotton genome stability across global … around two varieties: 95 percent of what is grown is known as Upland cotton ( Gossypium hirsutum ), while the remaining … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

JGI-led team significantly expands the global diversity of large and giant … population, the number of viruses in the same drop—the vast majority not harmful to humans could be even larger. … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights …

Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … proposals addressed one of the following focus topic areas: Biofuels and bioproducts, Biogeochemistry, and …

For the first time, a team has comprehensively described host-virus dynamics in a … mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends … the predator-prey dynamics in these mats helps constrain models that estimate biogeochemical fluxes. Summary Previous …

Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to … use billions of tons of the carbon dioxide trapped in biomass each year to do so. As such, they are considered to have … with the JGI on a proposal using this approach through the Emerging Technologies Opportunity Program (ETOP). Following …

… applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in Tennessee — the … researcher at the Oak Ridge National Laboratory (ORNL), based in Oak Ridge, Tennessee. Recently, Lawrence, in … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …