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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The … This research was supported by grants from the Simons Foundation … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science … advance foundational science and enable biotechnology discoveries. (Pictured from left to right: Peng Wang, Sravanthi … to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … Sorghum bicolor on Phytozome … Learn more on the EPICON project … Plant Datasets …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC … language processing techniques to categorize genetic information. Learn more about their work here in a series of … Intern: Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image to …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties grow best in certain … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought … The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … This research project was supported by a grant from Santa Barbara …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … Research was supported by grants from the USDA NIFA AFRI … and P.Z.) for diterpenoids, by a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research … enrichment activities. For some students in the 2021 cohort, this was their first internship experience, while … Blurring the Line Between Plasmids and Phages …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … of the bacteria potentially holds the key to discovering new antiviral medicines and treatments for …
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