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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from … This work was funded by the US National Science Foundation (NSF) CAREER award (DBI-1652164, …
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Capturing the genetic makeup of the active microbiome in situ
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Defining the core Arabidopsis thaliana root microbiome
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Ecology and molecular targets of hypermutation in the global microbiome
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A global survey of arsenic-related genes in soil microbiomes
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