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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … can uncover more about cellulose-degrading microbes. The new technique is another tool for microbial ecologists to …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … a foundational data set that is now available through a new  single-cell data viewer that was collaboratively …
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Jeremy Schmutz
For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic … switchgrass. Nature 590: 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Gut Fungi: Unexpected Source of Novel Chemicals
… can whip up dozens of complex natural products, including new ones. The Impact In the past, natural products have been … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Sequencing Technologies
… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly …
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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could … water, and humans—around the world. By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the …
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Fungal Friends or Foes in Plant Roots
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in root mycobiomes weren’t necessarily the most abundant members of these communities. In contrast, many of the fungi …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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An Integrated Dataset to Understand Ecosystem Interaction
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The work ( https://doi.org/10.46936/10.25585/60000017 ) conducted by the U.S. Department of Energy Joint …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, and … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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