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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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2024 Progress Report
… user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the … Our primary objective is to serve our user community with large-scale advanced genomic capabilities. This year we … initiation and progress calls, outreach activities and hosting visiting scientists at all stages of their careers. …
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Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass
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Project Management Office
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Finding the Fermenters
… called fermentation. To better understand the range of bacteria and archaea that rely on this form of metabolism, … the genomes and predict the metabolic abilities of these microbes. The Impact This study illustrates how the research … used  Fermentation Explorer ( GitHub ) with a series of large datasets. One test was to predict traits of more than …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Silencing of Dicer‐like protein 2a restores the resistance phenotype in the rice mutant, sxi4 (suppressor of Xa21‐mediated immunity 4)
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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JGI Early Career Researchers Featured in mSystems Special Issue
… outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the … reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research scientist Simon … and environmental processes, especially by modifying host cell metabolism and altering cell fitness. As the vast …
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