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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome and … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a concern as extreme weather …
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The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… fellow at the Biological and Environmental Sciences and Engineering Division at King Abdullah University of Science …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… summer sea ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, … as well as contributing to nutrient cycling in these ecosystems. Researchers studied P. psychrophila’ s stress … . … The study was funded by Natural Sciences and Engineering Research Council of Canada (NSERC) Discovery …
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JGI announces 2024 New Investigator portfolio
… list of researchers whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers will dive … grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean shores. Their …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… of viruses impact many ecological processes, including carbon cycles. “Whether or not you planned it, viruses are most likely in your system and in your data, and they’re probably influencing … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 …
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I-Min (Amy) Chen
… of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in 2006, she was Director of Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible … updates and new features. Nucleic acids research Jan 2023 Camargo AP, Nayfach S, Chen I-MA, Palaniappan K, Ratner A, …
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Microbiome Data Science Team
… and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of … viruses with an expanded complement of translation system components.  Science  356: 82-85 Ovchinnikov S. et …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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Polar Phytoplankton Need Zinc to Cope with the Cold
… ocean-dwellers called phytoplankton play an outsize role in cycling carbon and nutrients. These microscopic algae have managed … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Partners
Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National …
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