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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … the door for me in the sense that I learned many different tools in bioinformatics research. Also, it consolidated my … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating … In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao beans – was released by a Mars, …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … and … that was really the foundation for many of the tools that are available these days and that are widely used …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens … them to close relatives who don’t engage in the lichen lifestyle. The team’s results appear in  BMC Genomics . To …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host … — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …
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User Executive Committee
… on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review procedures and the annual user …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for …
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to advancing the frontiers of … genomics. Click on the images below to learn about the science depicted. The two-story JGI mural was commissioned …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The Integrated Microbial Genome Resource of Analysis
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