Search

… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …

… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, … this approach to uncover a novel group of giant viruses dubbed “Klosneuviruses.” Previously known members of the viral …

… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …

Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category … part of a JGI team that led a community effort to develop guidelines and best practices for defining virus data …

… quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …

… coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … S. coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of …

Data from marine heatwave event may foreshadow climate … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for the accepted … or by allowing the generation of preliminary data for a larger study.” … The U.S. Department of Energy …

… to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … a proposal. Describe in detail what you will do with the data! Ideally, you or someone on your team will have … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has … the JGI’s genomic capabilities are ready and applicable to users.  … Sequencing Technologies Lead …