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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and … DNA (ssDNA). The discovery was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) Joint …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … fellow in the Juenger lab and continues to work on the project from a lab at Michigan State University that is … puzzle with just 50 pieces. The combination of new genetic tools and experimental gardens allow researchers to detect …
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DOE JGI Interns Share Their Summer Experiences
… Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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Identification and characterization of a skin microbiome on Caenorhabditis elegans suggests environmental microbes confer cuticle protection
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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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Four Researchers Join JGI User Executive Committee
… advanced genomic capabilities, large-scale AI-ready data and expertise to the global research community to study … is also interested in contributing to discussions on JGI data reuse and attribution.  Bonito is an associate … Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome …
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Graduate Students Get Thesis Research Opportunity at the JGI
… between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … and this is a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving …
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Access to Rock Star Scientists
… by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. … to know you and provide all resources to excel in your project.”     Vicente Ramirez, UC Merced JGI Mentor: Albert … helpfulness and patience of my JGI PIs, having lots of data to play around with.” …
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Effects of Polar Light Cycle on Microbial Food Web
… (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for the accepted … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … or by allowing the generation of preliminary data for a larger study.” …
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Cultivating Symbiotic Antarctic Microbes
… (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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