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Protist impacts on marine cyanovirocell metabolism
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An orthogonal metabolic framework for one-carbon utilization
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Metabolic engineering for valorization of macroalgae biomass
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Streamlining Regulon Identification in Bacteria
… environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … scientist Hiroshi Otani. Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey leads. … S. coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of …
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Mateus Fiamenghi
… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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Antonio Camargo
… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Triggering Morel Fruiting
… because they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related decomposition … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  … . … Morel Mushrooms on MycoCosm Data Portal …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … a proposal. Describe in detail what you will do with the data! Ideally, you or someone on your team will have … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … and … that was really the foundation for many of the tools that are available these days and that are widely used … actually tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on undergraduate …
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A Natural Mechanism Can Turbocharge Viral Evolution
… has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … level. Scientists might then harness them as molecular tools for research and industry applications. Summary In … and through a Challenge Grant from the California NanoSystems Institute at the University of California Santa …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… and analyze the single nuclei and spatial transcriptomics data this work leverages.   These experiments focused on two … hair. At such resolution, this spatial transcriptomics data captured molecular information from both plant cells … grasses, like sorghum and switchgrass. We’re optimizing systems now, so that we can get those working,” Cole said.  …
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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