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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … sequence information to BER-funded activities of plant systems that make use of these resources will present on …
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JGI Workshops at PAG
… sequence information to BER funded activities of plant systems. We will describe how to apply for a project with …
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Matthew Kellom
… and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… of topics related to structural biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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User Advisory Committees
… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… in their neighborhoods and nearby forests with the right tools to track infection. The parallel development of the … large-scale “citizen science” project to generate real-time data for modeling and predicting the spread of a plant … 500 people participated in SOD Blitz activity, and these data were subsequently used by three million others in the …
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Tanja Woyke
J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held January 19, 2021. …
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JGI at the AGU Fall Meeting
Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … “EMSL’s 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center … Weisenhorn, KBase at Argonne (lightning talk): “Applying Data Standards and Reproducible Workflows To Advance Earth …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
I started this, uh, summer internship was working with big data, but something that I learned from this program was how … And I’m excited to take that with me, along with other tools that I can use to, um, perform computational biology.  …
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JGI on the 2021 Highly Cited Researchers List
… multi-institutional research team that combined field data with a reference switchgrass genome to associate … aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research … viruses, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity …
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iPHoP: A Matchmaker for Phages and their Hosts
… more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …
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