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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … 2016, Nikos Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial and … tool, CheckV, assesses viral genomes, and grades their quality based on completeness. Along with expanding the …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate … size of the United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures … which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than …
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of … be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the … … Reference genome of Setaria viridis … Datasets …
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Ken Chu
… of analytical tools and user interface components for the IMG family of systems. …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA … and uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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Ray Turner Completes Last Tour of Lab Duty at JGI
Ray and it has been especially called on in the move to the new building where that was really critical. It takes a … Ray oversaw the acquisition and renovation of Building 310, adding the crowning piece of the entire 80,000 square … of them on a daily basis.” In retirement Ray hopes to spend quality time with friends and family, golfing, traveling a …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  The … I started this, uh, summer internship was working with big data, but something that I learned from this program was how …
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