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Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants
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Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts
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Antarctic lake viromes reveal potential virus associated influences on nutrient cycling in ice-covered lakes
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MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes.
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … also worked together on the development of a new software tool called geNomad that identifies and classifies mobile … and evaluates multiple predictions to reliably match viruses with their archaea and bacteria hosts.  Jeremy …
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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis has been … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …
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2024 Progress Report
Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area … also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department … to realize our new vision to, “ Lead genomic innovation for a sustainable bioeconomy ” — as articulated in our new …
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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Socotra Island the forgotten fragment of Gondwana: Unmasking chameleon lizard history with complete mitochondrial genomic data
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