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… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel …

… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … at the University of East Anglia, leads this effort to understand what makes polar photosynthesizers tick. … his team then linked those species-level observations with data on microalgal communities across different ocean …

The PhycoCosm data portal allows anyone to freely investigate the genes of … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …

For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … of them on a daily basis.” In retirement Ray hopes to spend quality time with friends and family, golfing, traveling a …

Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … focused on stable and accurate computational methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC …

For many scientists, the culmination of their work into a … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene not only …

… to advance foundational science, creating opportunities for the global research community. The U.S. Department of … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … expect to offer our user community an exciting range of new tools and capabilities to support their scientific …

… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  recently published in the journal  … Relevant Links: Single-Cell Data Viewer Tool on Phytozome Biosciences News:  Plant Single-Cell …

… months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … ” Anna Kucherova : “I got to learn about skills and tools that I’d never done before from my mentors. Also, …

… , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to counter … . … Phakopsora pachyrhizi on MycoCosm Data Portal …

… his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a … the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA … in regulatory sequences influences human disease/biology. Assessing and exploiting next generation sequencing …

… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics …