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Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem
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Chaparral wildfire shifts the functional potential for soil pyrogenic organic matter and nitrogen cycling
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Environmental matrix and moisture influence soil microbial phenotypes in a simplified porous media incubation
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Genome analysis reveals diverse novel psychrotolerant Mucilaginibacter species in Arctic tundra soils
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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and … genomic technologies and to understand genome function in bacteria. … BS in Biochemistry and Biological Chemistry, Nottingham …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s … watering conditions, and then collected root, leaf and rhizosphere (soil surrounding the root) samples from the …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership … with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and … to learn more about the program's areas of focus, major initiatives and more.  …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … ‘Dark Matter’ Microbial communities living everywhere from soils and stomachs to the deep sea are capable of doing a … that the majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? … senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the things that I … CRISPR-Cas9 that enhanced their ability to redirect the carbon in the cells toward particular pathways. In this …
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Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential
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