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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold … array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  … work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and …
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Ian Blaby
Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … availability to carbon metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., … algal NADPH oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. …
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Nikos Kyrpides
… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and … at the University of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on … al. 2021. A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 8674:00585-7. Nayfach S et …
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Len Pennacchio
… joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address … generated one of the first mouse models for this common neurological disorder. In 1999, he was named a DOE … He is funded by DOE and through continued competitive grant support from NIH. … BA in Biology, Sonoma State …
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A Step Toward Controlling Soybean Rust
Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much … percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of … soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010. …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an …
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A Plant Root Atlas for Tracking Developmental Trajectories
… of British Columbia, Philip Benfey at Duke University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … species of Olpidium are obligate endoparasites of some common crops, such as lettuce and tobacco. Olpidium itself … but not with the flagellated chytrids. This result has substantial implications on the inference of the evolution of …
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of … and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined forces and data …
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The Expanding Universe of Methane Metabolisms in Archaea
Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key role in determining the composition of the Earth’s atmosphere and regulating the … to the different pathways we see today is not only important to understand early life, but also to link the evolution …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the … 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … at the JGI and Berkeley Lab, LRC, and at the Université des Antilles, described the morphological and genomic features …
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Ben Bowen
… spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … Prabhat, Mahoney, M., & Bowen, B. (2015). Identifying important ions and positions in mass spectrometry imaging data …
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