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Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
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Parallel Evolution of Truncated Transfer RNA Genes in Arachnid Mitochondrial Genomes
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. Because the …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the energy-producing …
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Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil
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Simple and Rapid Site-Specific Integration of Multiple Heterologous DNAs into the Escherichia coli Chromosome
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified viral …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … the gene sequences were cloned by the JGI.  The JGI’s DNA synthesis team synthesized and cloned both chitosanase …
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JGI Announces 2025 New Investigator Portfolio
… Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … capabilities such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions …
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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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Close association of RNA polymerase II and many transcription factors with Pol III genes
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