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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits …
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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Jeremy Schmutz
… eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed … of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. He provides … scientific project management for the reference eukaryotic genomes produced by the DOE Joint Genome Institute and the …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… to what extent.  “These new groups were discovered not by cultivation, like the original methanogens were, but they …
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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JGI@25: From Life at the Extremes to Editing Genomes
… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …
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A Complex Confection Decoded: Sugarcane Reference Genome
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Statement on the Use of Genomics Data
… date, or the publication date, whichever comes first. For nearly 40 years, the International Nucleotide Sequence …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… those selected by the DOE Office of Science as part of the Early Career Research Program (ECRP). His project, …
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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research … five universally conserved, protein-coding marker genes on nearly 2 million genomes, including isolates, … varying quality scores representing potential genomes, and nearly 44,000 metagenomes. All of the data are publicly …
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Effects of Polar Light Cycle on Microbial Food Web
… ago and has been well-studied by many researchers for nearly five decades. In these frigid systems, where organisms … spiked to 83%, only to dramatically fall to 1% in early spring and rebound by the late spring. Preliminary …
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Nikos Kyrpides
… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining … the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . 39(5):578-585. Nayfach S, et …
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