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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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Deconvolute individual genomes from metagenome sequences through short read clustering
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … datasets generated from sampling sites around the world, including data from several DOE-mission relevant …
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Boosting Small Molecule Production in Super “Soup”
… (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … at industrial scales. “Cell-free systems have been really powerful at finding ways to accelerate bio-design and …
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Ancient Algae Reveal Secrets of Plant Evolution
… and multicellularity enabled plants to develop complex structures and adapt to changing environments — ultimately … resilient crop varieties able to grow in marginal lands and with minimal resources. Enabling the use of non-arable land … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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BIGMAC : breaking inaccurate genomes and merging assembled contigs for long read metagenomic assembly
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Webinar: Introducing the BioSANS capability
The BioSANS instrument is at the Center for Structural Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a … (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, …
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