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The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis has … life cycle. For example, in the fall the plants store nitrogen in its rhizomes – in the form of the nitrogen-rich …

To provide broad plant genomic capabilities, the DOE Joint … and involves more than 17 research groups. The team set out to characterize the transcriptome – the complete set of RNA … comparable study, where plants were subjected to three nitrogen sources (urea, ammonium, and nitrate) as the sole …

Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … the biological mechanisms that enable fungi and algae to play a vital role in carbon cycling, biodegradation and … This research helps translate their genomic potential into practical applications, including sustainable biofuels, …

Journal publication caps JGI pilot project with fledgling Florida … evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was …

… that showcase our collaborations and capabilities to enable great science that will help solve energy and … a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the lab relegated … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … life cycle. For example, in the fall the plants store nitrogen in its rhizomes – in the form of the nitrogen-rich …

JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those … without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing …

Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of … “Distribution of predominant high-temperature archaeal and bacterial lineages in Yellowstone National Park,” as well as …

Monitoring Inter-Organism Interactions Within Ecosystems Latest … highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 proposals have been approved … their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and blue ribbons …

… with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse … Google Scholar … Education … Awards and Service … Selected Publications …

We count on livestock for food and fiber, but raising these animals also … Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since … like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural Greenhouse Gas …