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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … abundant populations detected in the Washburn sediments and based on metabolic reconstructions, the team has two main … “Distribution of predominant high-temperature archaeal and bacterial lineages in Yellowstone National Park,” as well as …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … off with 12 plants, which are JGI Flagship Plants, mostly related to biofuels and feedstocks. And then we expanded … genes. It provides detailed functional annotations, protein homologs, plant family information, and a genome …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … after she left the JGI. “Biotin DAP-seq is a unique quick protein purification approach,” O’Malley said. “It provides … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Characterization of Streptomyces nymphaeiformis sp. nov., and its taxonomic relatedness to other polyhydroxybutyrate-degrading streptomycetes.
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of …
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Nigel Mouncey
… and Biotechnology (2021) 2016 World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for … Includes: Enhancing spinosyn production with oxygen binding proteins. (2014) U.S. Patent Application US8741603 …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol , 2023). These tools have significantly … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases …
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