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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … they need. Karolina is working to better understand what genetic features make CAM possible. So, she’s studying … podcast, Genome Insider. I’m Alison Takemura. See you next time. … The U.S. Department of Energy Joint Genome …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … sequencing. Shotgun metagenomic sequencing takes much less time than its single-cell counterpart. In this approach, DNA … it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … a renowned science popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals come from … generating their  genome sequences to improve breeding by genetic improvements. Apomixis is asexual reproduction …
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An Integrated Dataset to Understand Ecosystem Interaction
… features to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( Populus … data set will help identify how different elements of the ecosystem interact and respond to changes in the … Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel …
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single cell samples using our high throughput …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth … crowded place. ED: I mean I really think we’re at a unique time in human history, where we’re moving from when my …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 that enhanced their … jump in the rate of product formation.” This was the first time CRISPR-Cas9 had been used to modify a cell’s genome in …
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Training the Next Generation of Talent
DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole Johnson in Wang’s group on … could be considered.” Olmstead’s project focused on the genetic mechanisms of chemotaxis in the Arabidopsis …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … Researchers collected samples at several points in time to assess nutrient concentration and cell death. … production and natural fertilizers. By understanding the genetic and metabolic pathways involved in stress responses, …
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