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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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Frederik Schulz
… machine learning to find novel functions that may impact microbiome structure and biogeochemical cycles. He provides … changing protistan ecology of a temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of … Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. …
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Mike Sneddon
… by Ginkgo Bioworks. Earlier in his career, he was a core software engineer on the early KBase team at Lawrence … Selected Publications …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… head of the JGI’s DNA Synthesis Science program, underscored the value of taking a look at the AT family. … useful to differentiate these enzyme tools into two groups: core metabolism and specialized metabolism.  For enzymes involved in core metabolism, organisms tend to have enzymes evolved to …
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10 From JGI on the 2019 Highly Cited Researchers List
… effort to develop guidelines and best practices for defining virus data quality. Reported in Nature …
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Supercharging SIP in the Fungal Hyphosphere
… with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships …
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From Competition to Cooperation
… (form symbiotic relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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The leucine-rich repeats in allelic barley MLA immune receptors define specificity towards sequence-unrelated powdery mildew avirulence effectors with a predicted common RNase-like fold
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