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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why … —  through the  New Investigator call under our Community Science Program.  Below find a list of the first 10 …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequenced from curated DSMZ isolates, for which quality DNA has been provided by the team. These strains have been … DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also …
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Green Algae Reveal One mRNA Encodes Many Proteins
… reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples … zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … the JGI, like IMG-ABC, and other academic efforts, SMC is already the most comprehensive BGC database available at 10X … Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … regulated by viruses in their environments. Environmental DNA sequencing can help scientist to recover the genomes of … information for an uncultivated virus genome. CheckV has already been applied to over 2.4 million viral genomes …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for the global research … and stimulate a bioeconomy, where renewable, biological resources drive processes, products, and services.  Advancing … the genomes of individual organisms or environmental DNA, and then using advanced capabilities to understand …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … many species able to occupy the regions where eelgrass flourishes. The plant can thrive in both frigid and tropical … Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly that enabled …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … multiple times in order to obtain enough zoospores. DNA and RNA samples generated from the zoospores were then … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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JGI Welcomes New UEC Members
… who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To view the full …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and down the … seed dispersal in wild populations for the first time.  “To our knowledge, nobody has ever discovered a dispersal gene … high heat while C3 crops have become less efficient at photosynthesis, a concern as extreme weather events become more …
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