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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under contract number …
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The fungus that made itself at home
… Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar … environments. As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and … and var. shastensis from North America – against a third fungal Serpula species, S. himantioides from Europe, that …
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JGI@25: From Life at the Extremes to Editing Genomes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … skills, wet lab skills and overall connections. Theo Loureaux : I wanted to first discover new methods with tools …
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Silver age of GOLD introduces new features
… Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine … freely available, and enabling large-scale comparative genomics analysis initiatives. GOLD not only curates …
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Engineered Root Bacteria Release Plant-Available Phosphate from Phytate
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Lignin content in natural Populus variants affects sugar release
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Agave REVEILLE1 regulates the onset and release of seasonal dormancy in Populus.
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Cultivating Symbiotic Antarctic Microbes
… they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … host cells. In the  Proceedings of the National Academy of Sciences , a team led by Rick Cavicchioli at the University …
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Extracting the Secrets of Secondary Metabolites
… helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … to insects. It is carried by an infectious nematode and releases toxins into the insect’s bloodstream that quickly …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Jeremy Schmutz
… back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, … Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant …
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