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Viruses Reprogram Cells into Different Virocells
… be a duck. But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a … State University and the University of Michigan studying how virus infections cause significant metabolic changes in … In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are …
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VEGA Symposium
…   Register here  Registration fees:  Early Bird rates available now General & Berkeley Lab Attendee – $250 … a “Viral Ecogenomics” community to foster discussion on how to best capture and characterize uncultivated viral … VEGA 26 will take place at the UC Berkeley MLK Building, in the East Pauley …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … genomes, but unfortunately there are not many available to study. This is because most fungal clades have no reference … to connect educators and empower them to utilize program resources. MICROnet is  built around a community of instructors …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated … fungal reference genomes, this program is an important initiative that expands and diversifies workforce training in …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes …
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JGI@25: Strengthening Soybean
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … more about the soybean genome sequence and ASR in this JGIota, a Genome Insider podcast minisode.)  In 2016, the … Plant Datasets … Fungal Datasets …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and … nutrient cycling, greenhouse gas emissions, and water recycling.” Tringe is the interim director of Berkeley …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to … As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative genomes of …
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Building Wet and Dry Lab Skills
… grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah Mikes worked with mentors … plant root exudates on the plant microbiome. This year, however, there was a new aspect to the project - they also … about how to analyze data. Zyiah Mikes : Dr. Yi Zhai is our mentor for our experimental work or our wet lab stuff. …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Virus Discoveries that Keep Getting Bigger
… from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last … to provide a perspective on giant virus diversity, and how sequencing and bioinformatics have sped up the study of … balloons, releasing vast amounts of calcite and nutrients back into the ocean. Because other giant viruses live …
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