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The Expanding Universe of Methane Metabolisms in Archaea
… into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … sediments and based on metabolic reconstructions, the team has two main hypotheses: the novel korarchaeon could …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … off.” Yet, after extensive study, Hatzenpicher and his team were able to definitively prove two other archaea … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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River microbiomes from around the world: Kelly Wrighton
… sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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A Grass Model to Help Improve Giant Miscanthus
Communications by an international, multi-institutional team. The work was a joint effort led by scientists at the … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … the carbon away from methanogens. In The ISME Journal, a team led by researchers from the University of Konstanz and …
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A Community Resource for Secondary Metabolite Researchers
… are produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint … biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … Synthetic Biology . 5: 1. 2020 Nguyen et. al., ManiNetCluster: a novel manifold learning approach to reveal the …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision … to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, technology, engineering, and …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The selection process for … genetic code. More recently reported in Nature , she led a team that reconstructed more than 2,000 genomes of large and …
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Decoding Yellowstone’s Microbial Mats
… they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to …
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Exploring the Diversity of the American Prairie’s Switchgrass
… and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan to begin to link …
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