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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during … community of a gutless oligochaete for which she deciphered function and host-symbiont interplay using metagenomics. … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … 15.  Q: What is the user annotation process (are these functional annotations) and how are these integrated within … us and we can add it. 22.  Q: How many genes have unknown function in fungal genomes? A: There is a broad range of …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a month now since …
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CSP Large Scale Call
… focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … While applications will be accepted that address any aspect of these mission areas, priority will be given to projects …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers … with a powerful addition to their toolkit to study gene function. As a demonstration, the researchers used …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … to better understand how these hydrothermal ecosystems function in such extreme conditions. They identified 511 new … shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as those that play a role in …
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Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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