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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal microbe. Understanding how these …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and …   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions of years … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be converted to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … produced in every corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed …
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What Happens Underground Influences Global Nutrient Cycles
… EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … As such, JGI is involved in a broad variety of genomics projects that relate to energy and the environment.” she …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny … New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum … of Energy, the Gates Foundation, the Advanced Research Projects Agency-Energy (ARPA-E) and the United States Agency … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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