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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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Nikos Kyrpides
… microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… they found that microbial community composition and functional potential varied across tree species and sites, … It also provides further insight into the ecology and functional potential of the phyllosphere, extending beyond … of atmospheric aerosols. Understanding the composition and functional potential of these microbes is crucial to …
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DAP-seq Drives Robust Mapping of Gene Regulation
… 10 species ranging from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said … of years of evolution, suggesting it plays an important functional role in regulating gene expression. Focusing on … widely across genomes, the team found only a subset were functionally relevant. Those conserved across species tend …
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Three Join the JGI User Executive Committee
… Wilbanks has served on review panels for the JGI’s Functional Genomics CSP and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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User Support Analysis Group
… focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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A Model System for Perennial Grasses
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers may often …
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