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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … include the development of novel computational tools to identify virus sequences, the design of new …
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University of California, Merced Internship Program
Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them …
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2025 NeLLi Symposium
… coverage. Experts in cultivation and environmental genomics will work together to develop recommendations for … 48″ wide or less to ensure 2 posters fitting on the boards. JGI posters are typically printed in the ARCH E size which … … Where to stay? … How do I submit an abstract? … Refunds … JGI Organizers … External Organizers … Jasmine Bunn , …
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Ken Chu
Ken leads the development and maintenance of analytical tools and user interface components for the IMG family of …
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Douglas Mans
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Neha Varghese
… and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user … through implementation of advanced analysis pipelines and tools as well as development and implementation of …
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Outreach Stories
Interested in reading more JGI intern and mentor success stories? Read more below. …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota … type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … When viewing the full distribution of switchgrass on a map, these 8X individuals occurred in parts of the …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving over …
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Ancient Algae Reveal Secrets of Plant Evolution
… them to adapt to life on land. Learning that these genetic tools existed in close algal relatives  to terrestrial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … This work was funded by the US …
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How to Target a Microbial Needle within a Community Haystack
… microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Development of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP …
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