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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… production. Also notable, researchers found it is missing 33 genes thought essential for photosynthesis, yet still … Scientists have already used this alga to understand how genes with unusual structures work in green algae. The … and Environmental Research program under award no. DE-SC0023027 (to SSM and JLM) with support from the Gordon and Betty …
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Yasuo Yoshikuni
… of citramalate., Metabolic Engineering Communications , 2023 Wu et al. Structural characterization of a soil viral … - a functional chitosanase., Nature Communications , 2023 Zhao and Yoshikuni, Discovering untapped biochemistry in … Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β-Linked GlcNAc …
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Ian Blaby
… metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool … Frontiers in Bioengineering and Biotechnology. 11. 2023 Liu et. al., Bacterial genome editing by coupling Cre-lox … and metabolic differentiation. The Plant Cell . 27: 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… that could help crop breeders and researchers predict how crops and model organisms may evolve.  Determining the …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… ZW rather than ZZ encodes for females. To better understand how sex determination works in shrub willow, researchers … response regulator that was expanded in a palindrome and shown to be undergoing gene conversion in willow. This gene … by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key …
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Cultivating Symbiotic Antarctic Microbes
… researchers have been able to gain further insights about how microbes have adapted to thrive in polar ecosystems. The … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the … successfully cultured two strains of Nanohaloarchaeota and showed they required cell-cell contact with the Antarctic …
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John Vogel
… Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual … lineages of allotetraploid Brachypodium. Genetics, 223 (2), art. no. iyac146 DOI: 10.1093/genetics/iyac146 … 27124-27132 Sasse, et. al.J. 2019 Multilab EcoFAB study shows highly reproducible physiology and depletion of soil …
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Graduate Students Get Thesis Research Opportunity at the JGI
… at 12 host national laboratories or facilities between 3-12 consecutive months. Their proposed research projects … launch a pilot project and begin the work of understanding how engineered environments contribute to greenhouse gases,” … 20 UC Merced students have contributed to the research of 13 JGI scientists through the JGI-UC Merced Genomics …
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Doubling Down on Known Protein Families
… to see beyond the beam — worse, they didn’t even know how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … organisms, but we still aren’t sure of their function.  However, if a gene in the community doesn’t match any of the …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Tara Oceans Expeditions that took place between 2009 and 2013, the  Chaetoceros genus has been identified as the most … in learning more about the fungal endophytes of soybean and how they deter two significant pathogens, the soybean cyst …
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Taking Stock of the Known and Unknown Microbial Space
… into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually captured,” said … biofuels and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of Wu, … the known diversity of microbial genomes in the datasets, however, the team added that this information is still …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ … physiologically and enzymatically, with descriptions of how their activities influence biochemical reactions. For …
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