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Genome‐wide scans of selection highlight the impact of biotic and abiotic constraints in natural populations of the model grass Brachypodium distachyon
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A multi-omic survey of black cottonwood tissues highlights coordinated transcriptomic and metabolomic mechanisms for plant adaptation to phosphorus deficiency
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Strategies for community-sourced biocuration in bioinformatics: a case study on MIBiG 4.0
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within … The work is of interest to the Department of Energy (DOE) Office of Science’s Biological and Environmental … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Natural Mechanism Can Turbocharge Viral Evolution
… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … a team led by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … Office of the President. This work was part of the DOE Joint BioEnergy Institute ( http://www.jbei.org ) …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of … the event and shared updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant …
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Symbiotic nitrogen fixation in the reproductive structures of a basidiomycete fungus
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … and the JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the … viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets … and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Annotation survey and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit
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