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Tanja Woyke Elected to American Academy of Microbiology
… of 2020, selected from 118 nominees. The selection process for AAM Fellows is based on their records of scientific … Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells … caliber support the JGI User community in accessing our resources and help them to push the boundaries of energy and …
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … hemicellulose. The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of … components present in plant biomass. This is of interest for bioenergy researchers looking to improve the industrial …
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Expanding Virophage Diversity
… By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able … & Applications (VEGA) Symposium. The work also used resources of the National Energy Research Scientific …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes … National Synchrotron Light Source II (NSLS-II). Leveraging resources from user facilities funded by the Biological and … MarS has evolved as a safety switch, to conserve resources.  Despite its important role in this system, the …
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Cultivating Symbiotic Antarctic Microbes
… to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe … of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … the Rauer 1 and Club lakes in East Antarctica and enriched for native microbes. Metagenomes from enrichment cultures …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the resources and disciplines advanced by the JGI, we seek to … technology, engineering, and mathematics (STEM) workforce. In doing so, it is our ambition to further develop a …
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Frederik Schulz
… sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel … of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “Thermoanaerobacter cellulolyticus”
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Four principles to establish a universal virus taxonomy
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily growing worldwide population. Anuvia Plant … drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil …
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Plant Microbial Interactions Group
… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this …
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