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… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … polar bears in winter scenes that came with crayons in various shades of white. To researchers searching for sequences … can impact the planet’s nutrient cycles. While most organism’s genetic information is encoded in DNA, with RNA …

… the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an important piece of how they regulate their … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help the pathogens … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office …

… from a large-scale field experiment to uncover the mechanisms behind sorghum’s capacity to produce high yields despite … (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … Metabolomics allowed them to then examine the chemicals and small molecules produced by the trees and associated …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … a cold-adapted microalga: the diatom Fragilariopsis cylindrus . At that time, they noted that the F. cylindrus genome … zinc-binding proteins are important for primary metabolism such as photosynthesis and gene regulation.  Mock and his …

… single root cells and combining the information with previously published datasets. The work was  recently published in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Career Research Program (ECRP) award, which is also focused on single-cell and spatial transcriptomics …

… species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … that tests to find associations between genotype – an organism’s genetic makeup – and phenotype – an organism’s physical … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim …

… With increased lignin and iron, engineered poplar can be used to develop bioproducts for industrial applications. For example, lignin could be used for … researcher provided insights into how the regulatory mechanism evolved.  BNL scientists performed confocal microscopy at …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … mining, empowering research collaborators to take on ambitious synthetic biology experiments. A recent special issue of … Genomics-enabled analysis of specialized metabolism in bioenergy crops: current progress and challenges , …

… ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of … al. A thermostable Cas9 with increased lifetime in human plasma. Nat Commun. 2017 Nov 10;8(1):1424. doi: …

… model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a close … to switchgrass. Summary Rising global temperatures are causing extreme weather events, ranging from prolonged …

… highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often … relative of the oak. These fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on … work (proposal:10.46936/10.25585/60001048) conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a …