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Trent Northen
… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments …
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, …
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Fungus Fuels Tree Growth
… a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … an endophyte, living between a plant’s root cells. The fungus is almost always found among and within poplar trees, and … were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . …
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Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium
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University of California, Merced Internship Program
… graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … to apply the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall … northern Everglades in Palm Beach County, and particularly about the microbes that play roles in the methane cycle. …
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Fungal Friends or Foes in Plant Roots
… fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of the key community participants and enabling future metagenomics studies.   …
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Defining a Pan-Genome for Antarctic Archaea
… haloarchaea from different Antarctic lakes. To assess the genomic variation in haloarchaea, they also characterized … sequences from six hypersaline lakes, researchers focused on understanding the genomic variation in haloarchaea … and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme cold, high levels of …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … of the plant, that eelgrass began colonizing the oceans  about 3 million years ago. The study shows that figure is … and by a grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … they are found everywhere, comparatively little is known about viruses, much less those considered large and giant. … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… to right are: [Above] Sara Branco, Asdrubal Burgos, Posy Busby, Hao Chen, Jay Chen, Maureen Coleman and Hugh Cross; … This portfolio accelerates bioenergy innovation through genomic discovery across diverse organisms and ecosystems. … and their commitment to tackling fundamental scientific challenges aligned with DOE’s mission.” The Community Science …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes … equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor …
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