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SAR11 bacteria linked to ocean anoxia and nitrogen loss
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Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota
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BinaRena: a dedicated interactive platform for human-guided exploration and binning of metagenomes
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four … different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. …
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Igor Grigoriev
… training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …
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Ian Blaby
… the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … 11. 2023 Liu et. al., Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students … Woyke) Kyle Kabasares (Major: Physics; Faculty Mentor: Dr. Linda Hirst) Christian Montes (Major: Applied Math; Faculty … at UC Merced. Cristhian and Bryan both spoke briefly about their internship experiences at the DOE JGI – revisit …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for recycling. But some hungry insects can digest plastic. So … how these critters process plastic, to improve plastic recycling by following their lead.            …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & …
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ORT: A workflow linking genome-scale metabolic models with reactive transport codes.
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Young inversion with multiple linked QTLs under selection in a hybrid zone
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