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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … genomics can add significant value to the other commonly used culture-independent sequencing approaches including … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Annual Meeting 2027
…   Save the Date: March 16–18, 2027 The next JGI Annual Meeting will be held in March 2027 at the Oakland … Stefani Ferreira , JGI Administrative and Logistics Support  …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … explained. “This kind of discovery opens new questions about bacterial morphotypes that have never been studied …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its … and a part of the oil-producing Mucoromycotina group, about which little is known. The Cornell team cultivated and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high …
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Evolution and expression of core SWI/SNF genes in red algae
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared with … insights in lignin biosynthetic pathway edited populus …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … work (proposal:10.46936/10.25585/60001048) conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory … a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting … Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS proposals have helped advance …
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Supercharging SIP in the Fungal Hyphosphere
… The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with … HT-SIP is a capability available to request through  the JGI proposal calls . … Livermore National Laboratory was conducted under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. …
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Mapping Heat Resistance in Yeasts
… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence …
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